Index

_

__init__() (SPACEL.Scube.gpr.GPRmodel method)

A

add_cell_type_composition() (in module SPACEL.Splane.utils)

align() (in module SPACEL.Scube.alignment)

D

deconv_spatial() (SPACEL.Spoint.base_model.SpointModel method)

G

GPRmodel (class in SPACEL.Scube.gpr)

I

identify_spatial_domain() (SPACEL.Splane.base_model.SplaneModel method)

init_model() (in module SPACEL.Splane.model) (in module SPACEL.Spoint.model)

L

lengthscale_prior (SPACEL.Scube.gpr.GPRmodel attribute)

log_bf (SPACEL.Scube.gpr.GPRmodel attribute)

M

module SPACEL SPACEL.Scube SPACEL.Splane SPACEL.Spoint

N

noise_prior (SPACEL.Scube.gpr.GPRmodel attribute)

O

output_dir (SPACEL.Scube.gpr.GPRmodel attribute)

outputscale_prior (SPACEL.Scube.gpr.GPRmodel attribute)

P

plot_3d() (in module SPACEL.Scube.plot)

plot_gpr_expr() (SPACEL.Scube.gpr.GPRmodel method) plot_stacked_slices() (in module SPACEL.Scube.plot)

S

SPACEL module SPACEL.Scube module

SPACEL.Splane module SPACEL.Spoint module subset (SPACEL.Scube.gpr.GPRmodel attribute)

T

train() (SPACEL.Scube.gpr.GPRmodel method) (SPACEL.Splane.base_model.SplaneModel method) (SPACEL.Spoint.base_model.SpointModel method)

U

use_gpu (SPACEL.Scube.gpr.GPRmodel attribute)

used_genes (SPACEL.Scube.gpr.GPRmodel attribute)